作者
汪正河,王献珍
文章摘要
耐甲氧西林金黄色葡萄球菌(MRSA)感染,已然成为全球公共卫生领域面临的重大威胁,传统抗生素的治疗效果正逐渐变弱,当下迫切需要开发新型抗菌药物来应对这一难题[1],GyrA作为MRSA的关键靶点,开发其抑制剂对于抗击MRSA感染有着意义[2],近些年来,模态虚拟筛选方法凭借其高效以及精准的特性,成为筛选可靶向抑制MRSA GyrA靶点抗菌药物的关键工具。本文对模态虚拟筛选方法的基本原理、技术流程以及在MRSA GyrA靶点药物筛选中的优势进行了综述,还总结了最新的研究进展,凭借对现有文献展开综合分析,本文可为新型抗MRSA药物的开发提供理论依据与技术参考,期望能为抗击耐药性细菌感染提供新的解决办法。
文章关键词
模态虚拟筛选;耐甲氧西林金黄色葡萄球菌;GyrA;抗菌药物;分子对接
参考文献
[1] Kollipara R,Downing C,Lee M,Guidry J,Curtis S,Tyring S.Current and emerging drugs for acute bacterial skin and skin structure infections:an update.Expert Opin Emerg Drugs.2014;19(3):431-40.
[2] Luo Y,Wen Z,Xiong Y,et al.The potential target of bithionol against Staphylococcus aureus:design,synthesis and application of biotinylated probes Bio-A2.J Antibiot(Tokyo).2023;76(7):406-415.
[3] Lian X,Xia Z,Li X,et al.Anti-MRSA drug discovery by ligand-based virtual screening and biological evaluation.Bioorg Chem. 114:105042.
[4] Intravia JM,Osterman MN,Tosti R.Antibiotic Management and Antibiotic Resistance in Hand Infections.Hand Clin.2020;36(3):301-305.
[5] Ejaz M,Syed MA,Jackson CR,Sharif M,Faryal R.Epidemiology of Staphylococcus aureus Non-Susceptible to Vancomycin in South Asia.Antibiotics(Basel).2023;12(6).Published 2023 May 27.
[6] Somda NS,TraoréAME,Hien DFS,et al.Molecular characterization of Methicillin-resistant Staphylococcus aureus isolated in ready- to-eat food sold in supermarkets in Bobo-Dioulasso:case of charcuterie products.BMC Infect Dis.2024;24(1):722.Published 2024 Jul 23.
[7] Jakhar R,Khichi A,Kumar D,et al.Development of pharmacophore model to identify potential DNA gyrase inhibitors.J Biomol Struct Dyn.2023;41(19):10125-10135.
[8] Alotaibi BS,Hakami MA,Jawaid T,Alshammari N,Binsuwaidan R,Adnan M.Identification of potential Escherichia coli DNA gyrase B inhibitors targeting antibacterial therapy:an integrated docking and molecular dynamics simulation study.J Biomol Struct Dyn.2024; 42(17):8885-8896.
[9] Oluwafemi KA,Jimoh RB,Omoboyowa DA,Olonisakin A,Adeforiti AF,Iqbal N.Investigating the effect of 1,2-Dibenzoylhydrazine on Staphylococcus aureus using integrated computational approaches.In Silico Pharmacol.2024;12(2):102.Published 2024 None.
[10] Li M,Chen B,Xu M,et al.Identification of TonB-dependent siderophore receptor inhibitors against Flavobacterium columnare using a structure-based high-throughput virtual screening method.Front Microbiol.15:1392178.Published 2024 None.
[11] Fernandes PO,Dias ALT,Dos Santos Júnior VS,et al.Machine Learning-Based Virtual Screening of Antibacterial Agents against Methicillin-Susceptible and Resistant Staphylococcus aureus.J Chem Inf Model.2024;64(6):1932-1944.
[12] Jangsangthong A,Suriyakhun N,Tunyong W,et al.Occurrence of antimicrobial resistance and antimicrobial resistance genes in methicillin-resistant Staphylococcus aureus isolated from healthy rabbits.Vet World.2022;15(11):2699-2704.
[13] Sun Z,Chen J,Liu C,et al.Genomic insights into the spread of methicillin-resistant Staphylococcus aureus involved in ear infections. BMC Infect Dis.2025;25(1):661.Published 2025 May 6.
[14] Naha A,Ramaiah S.Structural chemistry and molecular-level interactome reveals histidine kinase EvgS to subvert both antimicrobial resistance and virulence in Shigella flexneri 2a str.301.3 Biotech.2022;12(10):258.
[15] de Oliveira TLR,Cavalcante FS,Chamon RC,Ferreira RBR,Dos Santos KRN.Genetic mutations in the quinolone resistance- determining region are related to changes in the epidemiological profile of methicillin-resistant Staphylococcus aureus isolates.J Glob Antimicrob Resist.19:236-240.
[16] Suriyakhun N,Jangsangthong A,Tunyong W,et al.Investigation of antimicrobial resistance and antimicrobial resistance genes in Staphylococcus aureus and coagulase-negative staphylococci isolated from rabbit.Vet World.2024;17(6):1328-1335.
[17] Lee GY,Lee SI,Kim SD,Park JH,Kim GB,Yang SJ.Clonal distribution and antimicrobial resistance of methicillin-susceptible and- resistant Staphylococcus aureus strains isolated from broiler farms,slaughterhouses,and retail chicken meat.Poult Sci.2022;101(10):102070.
[18] Klarich K,Goldman B,Kramer T,Riley P,Walters WP.Thompson Sampling─An Efficient Method for Searching Ultralarge Synthesis on Demand Databases.J Chem Inf Model.2024;64(4):1158-1171.
[19] Amarasinghe KN,De Maria L,Tyrchan C,Eriksson LA,Sadowski J,PetrovićD.Virtual Screening Expands the Non-Natural Amino Acid Palette for Peptide Optimization.J Chem Inf Model.2022;62(12):2999-3007.
[20] Narayan S,Gooderham E,Spencer S,McCracken RK,Hedden L.Virtual Primary Care for People With Opioid Use Disorder:Scoping Review of Current Strategies,Benefits,and Challenges.J Med Internet Res.26:e54015.Published 2024 Dec 2.
[21] Petrie S,Laur C,Rios P,et al.Quality measures of virtual care in ambulatory healthcare environments:a scoping review.BMJ Open.2024;14(4):e078214.Published 2024 Apr 2.
[22] Kalhor H,Sadeghi S,Marashiyan M,et al.Identification of new DNA gyrase inhibitors based on bioactive compounds from streptomyces:structure-based virtual screening and molecular dynamics simulations approaches.J Biomol Struct Dyn.2020;38(3):791-806.
[23] Yuan J,Xiao P.[Challenges and countermeasures in the development of artificial intelligence research in ophthalmology].Zhonghua Yan Ke Za Zhi.2023;59(4):245-249.
[24] Zhang L,Cheng Z,Xu D,et al.Developing an AI-assisted digital auscultation tool for automatic assessment of the severity of mitral regurgitation:protocol for a cross-sectional,non-interventional study.BMJ Open.2024;14(3):e074288.Published 2024 Mar 29.
[25] Li M,Race M,Huang F,Escalon MX.Role of Virtual Reality to Promote Mobilization in the Critical Care Setting:A Narrative Review.Am J Phys Med Rehabil.2025;104(5):487-494.
[26] Flores R,Tlachac ML,Shrestha A,Rundensteiner EA.WavFace:A Multimodal Transformer-Based Model for Depression Screening. IEEE J Biomed Health Inform.2025;29(5):3632-3641.
[27] Shen A,Yuan M,Ma Y,Du J,Wang M.Complementary multi-modality molecular self-supervised learning via non-overlapping masking for property prediction.Brief Bioinform.2024;25(4).
[28] Cant R,Cooper S,Ryan C.Using virtual simulation to teach evidence-based practice in nursing curricula:A rapid review.Worldviews Evid Based Nurs.2022;19(5):415-422.
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